REVERSE TRANSCRIPTION POLYMERASE CHAIN REACTION-A REVIEW

K. Bhavya Sri, Shaheen Banu, Mogili Sumakanth

Abstract

The reverse transcription polymerase chain response is straightforward, powerful, and exquisite innovation in the discipline of molecular biology. It helps in determining the gene expression and amplifying the gene of interest in numerous fields used to locate and quantify the quantity of a given DNA collection. It entails three steps: reverse transcription, PCR amplification, and electrophoresis. Among PCR, the maximum commonly used PCR technique is reverse transcription polymerase chain reaction abbreviated as RT-PCR. it is way utilized in molecular biology & genetic research that allows the detection & quantification of mRNA. in this, RNA template is first converted into a complementary DNA by use of a reverse transcriptase enzyme and is further used for exponential amplification the use of the PCR method. Many genes are recognized to have their own promoter regions that inform cells where to begin transcribing the unique gene. RT-PCR first starts by using the usage of reverse transcriptase enzyme to make DNA out of RNA that has been extracted from cells or tissue samples. The RNA is in the shape of a polymer. The opposite transcriptase copies the RNA into an open-ended DNA strand, preventing it when it encounters a unique non-coding location known as a "poly-A tail" for each 20 to 23 nucleotides. The PCR method then begins by blending the newly made DNA with known primers to expand or reflect a selected piece of DNA. The pattern is then heated and cooled more than one instance, which causes the DNA to split into exclusive string sizes, brief and long. the quick string represents the newly copied RNA that can be visible as amplification, while the longer strand represents each the amplified RNA and all other non-amplified DNA portions collectively. The difference in the duration of DNA strands is what offers reverse transcriptase PCR its name. RT-PCR approach is performed in a thermocycler for the huge production of genetic fabric. It includes several wells, thermos regulators, a detector, and a gadget hooked up with appropriate software.

Keywords: Amplification, Thermocycler, Gene expression, cDNA, Molecular biology, RT-PCR, Template.

Full Text:

PDF

References

Polymerase Chain Reaction (PCR): National Center for Biotechnology Information. U.S. National Library of Medicine, 01 June 2017.

Polymerase Chain Reaction (or PCR), Cloning and Molecular Analysis of genes, 01 June 2017.

Biolabs, New England. “CDNA Synthesis and RT-PCR.” CDNA Synthesis and RT-PCR | NEB, 01 June 2017.

Rapley R, Theophilus BDM, Bevan IS and Walker WR: Fundamentals of the polymerase chain reaction: A future in clinical diagnostics. Med Lab Sci 1992; 49(2):119-128.

Mullis K, Faloona F, Scharf S, Saiki R, Horn G, Erlich H. Specific Enzymatic Amplification of DNA in vitro: The polymerase chain reaction. In: cold spring Harbour Symposia on Quantitative Biology 1986;51(1):263-273.

Pelt-Verkuil E, Belkum A, John P. A brief comparison between in vivo DNA replication and in vitro PCR amplification. Principles and Technical Aspects of PCR Amplification. Netherlands: Springer; 2008. pp. 9-15

Lawyer FC, Stoffel S, Saiki RK, Myambo K, Drummond R, Gelfand DH. Isolation, characterization, and expression in Escherichia coli of the DNA polymerase gene from Thermus aquaticus. Biological Chemistry. 1989;264:6427-6437

Marcela AAV, Rafael LG, Lucas ACB, Paulo RE, Alessandra ATC, Sergio C. Principles and Applications of Polymerase Chain Reaction in Medical Diagnostic Fields: A Review. Brazilian Journal of Microbiology. 2009;40:1-11

Maecela Agne, Rafael Lima, Licas Andre, Paulo Roberto, Alessandria de Tavaras and Sergio Crovela. Principles and Applications of Polymerase chain Reaction in Medical Diagnostic fields- A Review. Brazilian Journal of Microbiology. 2009;40;1-11.

Tahmiur Rahman MD, Muhammed Salahuddin, Razia Sultana, Arumina Moue and Muntahina Setu. Polymerase Chain Reaction- A Short Review. AKMMC. 2013;4(1):30-36.

Joshi M and Deshpande JD. Polymerase Chain Reaction-Methods, Principles and Applications. International Journal of Biomedical Research. 2010;1(5):81-97.

Tabitha M. The Polymerase Chain Reaction Breakthroughs in Bioscience- A Series of articles for general audiences.

Waleed A Ibrahim, Abdul Ghany A, Soad A Nasef and Hatem ME. Comparative Study on the Use of RT-PCR and Standard Isolation Techniques for the Detection of Salmonella in Broiler Chicks. International Journal of Veterinary Sciences and Medicine. 2014;2:67.

Pusterla N, Madiga JE and Leutenegger CM. RT-PCR A Novel Molecular Diagnostic Tool for Equine Infectious diseases. Journal of Veterinary Medicine. 2006; (20):3-12.

Kary Mullis B. The Usual Origin of Polymerase Chain Reaction. Scientific American Journal. 1990. 12. Lilit Gariyan and Nidhi Avashia. Research Techniques Made Simple PCR. Journal of Invest Dermatol. 2013; 133(3):6.

Pablo Perez-Pinera, Manuel Menendez Jose and Antonio Vega. Detection of DNA Sequences of Using PCR Based Approach. Electronic Journal of Biotechnology. 2006; 9(5):22-25.

Bria D Mariani, Daniel S Martin, Antonio F Chen, Haruyo Yagi, Shaldon S Lin, and Rocky S Taun. PCR-Molecular Diagnostic Technology for Monitoring Chronic Osteomyelitis. Journal of Experimental Orthopaedics. 2014; 19.

Ying Wang, Zhanli Wang, Chunfang Liu, Anma and Hui Yu. PCR-based Assays for the Diagnosis of Human Brucellosis. Annuals of Clinical Microbiology and Antimicrobials. 2014; 13:31.

Masool Majaz, Parvaiz Hassan, Vijeshwar Verma and Zafar Reshi. Inhibition of Polymerase Chain Reaction by Lithium chloride. International Journal of Life Sciences and Pharma Research. 2012; 2(4).

Margaret F Docker, Robert H Delvin, Jon Richard and Khattra J. Sensitive and Specific PCR- Assay Detection of Loma Salmonae (Microsporea). Inter search. 1997; 29:41-48.

Dangi SK, Singh AP and Dangi SS. PCR Amplification Cloning of Immunogenic Protein and Dependent Hydroxybutyracryl Dehydrogenase Gene of Clostridium Chauvoei. Veterinary World. 2015;7(10):848-51.

Thoraia Shinawi. Lab Manual of Molecular Biology Lab. M. Wink, Heidelberg; Bio forum Extra- Prague. 1994; 5-17.

Refbacks

  • There are currently no refbacks.